CPCe Literature Citations

CPCe

CPCe literature citations

(as of 3/3/2009)

Resilience Assessment of Coral Reefs: Rapid assessment protocol for coral reefs, focusing on coral bleaching and thermal stress. 2009. David Obura and Gabriel Grimsditch.
A User's Guide to the Coral Resilience Assay: A Protocol for Assessing Coral Response to Stress Version 3.1 . 2008. Erich Mueller.
Proposed Point Piper Marina. 2008. WorleyParsons.
Assessment of fish populations and habitat on Oculina Bank, a deep-sea coral marine protected area off eastern Florida. S.L. Harter, M.M. Ribera, A.N. Shepard, J.K. Reed3. 2008. Fish. Bull 107:195-206 (2009).
Only the Strong Will Survive: Red Tides as Community-Structuring Forces in the Eastern Gulf of Mexico. J. Dupont and C. Coy.In: Brueggeman P, Pollock NW, eds. Diving for Science 2008. Proceedings of the American Academy of Underwater Sciences 27th Symposium.Dauphin Island, AL: AAUS; 2008.
Using three-dimensional surface area to compare the growth of two Pocilloporid coral species. Glen Holmes, Juan Ortiz, Paulina Kaniewska, and Ron Johnstone. 2008. Mar Biol (2008) 155:421–427.
Evidence of species-specific habitat selectivity of Acropora corals based on identification of new recruits by two molecular markers. Go Suzuki, Takeshi Hayashibara, Yoshihisa Shirayama, Hironobu Fukami. 2008. Mar Ecol Prog Ser. Vol. 355: 149–159.
Diseases leading to accelerated decline of reef corals in the largest R.M. Reis, L. Kaufman, R.K.P. Kikuchi, Z.M.A.N. Lea. 2008. Marine Pollution Bulletin 56 1008-1014.
Live coral predation by parrotfishes (Perciformes: Scaridae) in the Abrolhos Bank, eastern Brazil, with comments on the classification of species into functional groups. 2008. R.B. Francini-Filho, R.L. Moura, C.M. Ferreira and E.O.C. Coni. Neotropical Ichthyology, 6(2):191-200.
Impacts of Bottom Trawling on a Deep-Water Oculina Coral Ecosystem off Florida. 2007. John K. Reed, Christopher C. Koenig, and Andrew N. Shepard. Bulletin of Marine Science.
Mapping reefs - Queensland researchers develop a photo mapping technique for benthic habitats. 2007. Chris Roelfsema and Stuart Phinn
Terra CEIA Re-route survey of marine benthic habitats within the proposed Port Dolphin Pipeline Corridor within Tampa Bay, Florida. December 2007.
Automated classification of underwater multispectral imagery for coral reef monitoring. A.C.R. Gleason, R.P. Reid, K.J. Voss. Oceans 2007. September 29 - October 4, 2007.
Regional Training Workshop in Coral Reef Monitoring. Caribbean Community Climate Change Centre. September 10-13, 2007.
National Marine Science Centre School Activity Program: Field and M. Green, S. Dalton, A. Harrison, A. Scott, A. McIlgorm.
Okeechobee Isolated Wetlands: Influences of Hydroperiod and Cattle on Vegetation. 2007. J. M. Neumann and M. W. Clark, University of Florida Soil and Water Science Department. Poster presentation
Long-term changes to Mackay Whitsunday water quality and connectivity between terrestrial, mangrove and coral reef ecosystems: Clues from coral proxies and remote sensing records. May 2007. S. Jupiter, G. Marion, M. McCulloch, O. Hoegh-Guldberg.
M/V WELLWOOD Coral Reef Restoration Monitoring Report: Monitoring Events 2004-2006. National Marine Sanctuary Program June 2007. J. H. Hudson, J. Anderson, E.C. Franklin, J. Schittone, A. Stratton.
CoReMo: Coral Reef Monitoring DataBase. User's Manual. Version 3.1. ARVAM.
Dredging Program for the Cape Lambert Port Upgrade. 2007. Sinclair Knight Merz Consulting.
Subtidal Benthic Community of the Cagarras Archipelago, RJ, Brazil. 2007. F.V. Ribeiro, R.C. Villaca. Coastal Studies Consortium Faculty-Student Workshop. July 4-6, 2007. Universidade Federal Fluminense
Effects of bottom trawling on a deep-water coral ecosystem. 2007. J.K. Reed, C.C. Koenig, A.N. Shepard. American Fisheries Society 137th Annual Meeting. San Francisco, California.
Monitoring Activities ln Kiribati 2005; Comparison Of Results With 2004. 2007. T. Kirata, C. Vieux, E. Clua. 21st Pacific Science Conference. June 12-18, 2007. Okinawa, Japan.
Scale and Benthic Composition Effects on Biomass and Trophic Group Distribution of Reef Fishes in American Samoa. 2007. M. G. Sabater and S. P. Tofaeono. Pacific Science, vol. 61, no. 4:503–520.
Nutrient Monitoring Program Methods. Mark Wieggers. Department of Environment. Netherlands Antilles Coral Reef Initiative.
Coral reef encruster communities and carbonate production in cryptic and exposed coral reef habitats along a gradient of terrestrial disturbance. 2007. J. Mallela. Coral Reefs. DOI 10.1007/s00338-007-0260-8.
Substratum preference during recruitment of two invasive alien corals onto shallow-subtidal tropical rocky shores.. 2007. J.C. Creed and A.F. De Paula. Mar Ecol Prog Ser.. Vol. 330: 101–111.
Spatial variability of epifaunal communities from artificial habitat: Shipwrecks in the Southern Bight of the North Sea.. 2008. V. Zintzen, A. Norro, C. Massin, J. Mallefet. Estuarine, Coastal and Shelf Science 76 p. 327-344.

Survey Report: Remotely Operated Vehicle (ROV) Biological Characterization Survey of the Asia America Gateway (AAG) S-5 Project Fiber Optic Cable Route Offshore Morro Bay, California. Prepared by Applied Sciences.
Long-term Effects of a Ship Grounding on Coral Reef Fish Assemblages at Rose Atoll, American Samoa. 2008. R.E. Schroeder, A.L. Green, E.E. DeMartini, and J.C. Kenyon. Bulletin of Marine Science, 82(3): 345–364.
Quantitative definition of Viosca Knoll Biotopes available to fishes of the Continental Slopei, 325-500m, Northern Gulf of Mexico.. K. Sulak, A. Norem, K. Luke, A. Randall, J. Miller.
Bal Harbour Mitigation Artificial Reef Monitoring Program Year 6 and 7.Miami-Dade County Department of Environmental Resources Management. 2007.
Influence of Palythoa caribaeorum (Anthozoa, Cnidaria) zonation on site-attached reef fishes. J. Mendonca-Neto, C. Ferreira, L. Chaves, R. Pereira. Anais da Academia Brasileira de Cięncias (2008) 80(3): 495-513 (Annals of the Brazilian Academy of Sciences) ISSN 0001-3765.
Ecological and Social Response of the Coral Reefs of Mu Koh Surin Marine National Park, Thailand, and Phuket's diving industry to the 2004 Indian Ocean Tsunami. 2007. Michiru Main, University of Victoria, Master's Thesis.
Resilience of a Red Sea Fringing Coral Reef Under Extreme Environmental Conditions: A Four Year Study. American Museum of Natural History 20008 Young Naturalists Awards.
Dynamics of a coral reef community after mass mortality of branching Acropora corals and an outbreak of anemones. 2007. K.S. Tkachenko, B.J. Wu, L.S. Fang, T.Y. Fan. Marine Biology 151:185-194.
Field work report: Funafuti Atoll and Tuvalu. 2006. CRISP Reef Restoration Project.
Baseline report: Funafuti Atoll and Tuvalu. 2007. CRISP Reef Restoration Project.
Comparison of Methods Used to Estimate Coral Cover in the Hawaiian Islands. 2005. P.L. Jokiel, K.S. Rodgers, E.K. Brown, J.C. Kenyon, G. Aeby, W.R. Smith and F. Farrell. Report to NOAA/NOS NWHI Coral Reef Ecosystem Reserve.
Second Post-construction Monitoring Survey of Nearshore Hard Bottom Habitats South of Fort Pierce Inlet, Fort Pierce, Florida. 2005. Continental Shelf Associates.
Solicitation Notice - Quantitative Analysis of Digital Imagery Recorded During Towed-Diver Surveys. Department of Commerce, National Oceanic and Atmospheric Administration (NOAA).
Final Report - Environmental Impact Assessment of the Fairy Hill Development Phase 2. 2006. Technological & Environmental Management Network Limited
M/V WAVE WALKER Coral Reef Restoration Baseline Monitoring Report-2004 Florida Keys National Marine Sanctuary Monroe County, Florida. Erik C. Franklin, J. Harold Hudson, Jeff Anderson. 2006. National Marine Sanctuary Program, National Ocean Service National Oceanic & Atmospheric Administration.
M/V CONNECTED Coral Reef Restoration Monitoring Report Monitoring Events 2004-2005 Florida Keys National Marine Sanctuary Monroe County, Florida. Joe Schittone, Erik C. Franklin, J. Harold Hudson, Jeff Anderson. 2006. Florida Keys National Marine Sanctuary National Marine Sanctuaries Program, National Ocean Service National Oceanic and Atmospheric Administration.
Development and application of a video-mosaic survey technology to document the status of coral reef communities. Lirman, D., Gracias, N.R., Gintert, B.E., Gleason, A.C.R., Reid, R.P., Negahdaripour, S., and P. Kramer.2006. Environ. Monit. Assess., DOI 10.1007/s10661-006-9239-0.
Comparison of rocky intertidal community sampling methods at the northern coast of Rio De Janeiro State, Brazil. Macedo, I.M, B. Pereira Masi, and I. Rosental Zalmon. 2006. Brazilian Journal of Oceanography, 54(2/3):147-154.
Remote sensing for coastal ecosystem indicators assessment and monitoring - Maps, techniques and error assessment for seagrass benthic habitat in Moreton Bay. Phinn, S.R., Roelfsema, C.M., Dekker, A.G., Brando, V.E., Anstee, J., and P. Daniel. 2006. Cooperative Research Centre for Coastal Zone, Estuary, and Waterway Management. Technical Report 76.
Long-term monitoring at the East and West Flower Garden Banks, 2002-2003: Final report. Precht, W.F., R.B. Aronson, K.J.P. Deslarzes, M.L. Robbart, T.J.T. Murdoch, A. Gelber, D.J. Evans, B. Gearheart, and B. Zimmer . 2006. U.S. Dept. of the Interior, Minerals Management Service, Gulf of Mexico OCS Region, New Orleans, Louisiana. OCS Study MMS 2006-035. 182pp.
New NOAA Software Package Will Help Scientists and Managers Monitor Coral Reefs. NOAA CORAL REEF NEWS. Coral Reef Conservation Program. National Oceanic and Atmospheric Administration. October 2004 Volume 2 No. 1
Variability and community organization in moderately exposed tropical rocky shore algal communities as influenced by different consumer groups.2008. Edison Roi D. Macusi. Master's Thesis. University of Bremen
The solitary ascidian Herdmania momus: native (Red Sea) versus non-indigenous (Mediterranean) populations. 2008. N. Shenkar, Y. Loya. Biol Invasions DOI 10.1007/s10530-008-9217-2
The State of Coral Reef Ecosystems of the Main Hawaiian Islands A. Friedlander, G. Aeby, R. Brainard, E. Brown, K. Chaston, A. Clark, P. McGowan, T. Montgomery, W. Walsh, I. Williams and W. Wiltse.

Linkages between coral assemblages and coral proxies of terrestrial exposure along a cross-shelf gradient on the southern Great Barrier Reef.S. Jupiter, G. Roff, G. Marion, M. Henderson, V. Schrameyer, M. McCulloch, O. Hoegh-Guldberg. Coral Reefs 27:887\226903 DOI 10.1007/s00338-008-0422-3.
Zonation of intertidal benthis communities on breakwaters of different hydrodynamics in the north coast of the state of Rio de Janeiro, Brazil. 2008. B. Masi and I. Zalmon. Rev. Bras. Zool. vol.25 no.4 Curitiba Dec. 2008.
Effects of age, size, and density on natural survival for an important coral reef fishery species, yellow tang, Zebrasoma flavescens. J.T. Claisse, S.A. McTee, J.D. Parrish. Coral Reefs 28:95–105 DOI 10.1007/s00338-008-0447-7.
Population dynamics of a coral reef ascidian in a deteriorating environment. 2008. N. Shenkar, O. Bronstein, Y. Loya. Mar. Ecol. Progress Series. Vol. 367: 163-171.
A Manual for Using GPS Referenced Digital Photo Transects to Validate Benthic Cover Maps
C. Roelfsema, S. Phinn, and K. Joyce. Centre for Remote Sensing and Spatial Information Science. University of Queensland, Australia.
Towed-Diver Surveys, a Method for Mesoscale Spatial Assessment of Benthic Reef Habitat: A Case Study at Midway Atoll in the Hawaiian Archipelago. Jean C. Kenyon, Russell E. Brainard, Ronald K. Hoeke, Frank A. Parrish, Casey B. Wilkinson
Effects of two sediment types on the fluorescence yield of two Hawaiian scleractinian corals. 2007. Gregory Piniak
Ivory Tree Coral Expedition: Assessing the Effectiveness of the Oculina Deep Coral Reserve
Margaret Miller, Andrew Shepard, John Reed, Grant Gilmore, Sandra Brooke, Stacey Harter
Assessment of Invasiveness of the Orange Keyhole Sponge Mycale armata in Kane'ohe Bay, Oahu, Hawaii.
Steve L. Coles, Holly Bolick, Kenneth Longenecker.
Bishop Museum. Department of Natural Sciences and Hawaii Biological Survey.
   Summary
   Quarter 1 - 2005
   Final Report - 2006
Spatial heterogeneity of epibenthos on artificial reefs: fouling communities in the early stages of colonization on an East Australian shipwreck. 2007. Simon J. Walker, Thomas A. Schlacher & Monika A. Schlacher-Hoenlinger. Marine Ecology.
Mapping the Coral Reef Habitats of Navassa Island 1: Single Beam Acoustics. (Paper OS26I-11). Art Gleason, Margaret Miller, David McClellan, Pamela Reid.
Assessment of video transect and CPCe methodology as a useful management tool for coral monitoring in Tobago. Charlotte Matthews, University Student Project, Buccoo Reef Trust.
Monitoring Tobago's Reefs using lasers, computers, and video. In: Out of the Blue, March-October 2005 issue. (3Mb, .pdf format)
The Marine Environmental Program (MEP) at BIOS, Inc.:MEP Sub-PROGRAM 2 - Ecological Surveys: Status and Trends
Post-settlement Life History of Key Coral Reef Fishes in a Hawaiian Marine Protected Area Network; Phase II
Maintien des populations de coraux Scléractiniaires en milieu insulaire fragmenté (archipel de la Société, Polynésie française) : influence du recrutement et de la mortalité post-fixation .2007. Lucie Penin. Doctoral Thesis. Université Paris VI - Pierre et Marie Curie - UFR des Sciences de la Vie.
Analyse de séries photographiques à long terme en NW Méditerranée: étude de traits de vie de l'éponge Crambe crambe (Schmidt 1862) (Porifera : Poecilosclerida). 2007. M.C. Pineda. Master's Thesis. Centre d'Océanologie de Marseille.
Analyse de séries photographiques ŕ long terme: étude de traits de vie d’espčces longévives des communautés du coralligčne de Méditerranée. 2006. Eva MÁrquez I. Canals. Master's Thesis. Universite de la Mediterranee ( Aix-Marseille II) Centre D’oceanologie de Marseille.
An Assessment of fluctuations in community composition on the reef flats of Ao Tan Khen, Phukey, Thailand 1991-2005 using contemporary analysis. T. C. Woolley, School of Marine Science & Technology, University of Newcastle, Newcastle upon Tyne, NE1 7RU
Monitoring the sea change: Preliminary assessment of the conservation value of nearshore reefs, and existing impacts, in a high-growth, coastal region of subtropical eastern Australia. 2008. Stephen D.A. Smith, Michael J. Rule, Matthew Harrison, Steven J. Dalton. Marine Pollution Bulletin 56 525-534.
Development of rapid, cost effective coral survey techniques: tools for management and conservation planning. Ralph Alquezar and Wayne Boyd.J Coast Conserv (2007) 11:105-119 DOI 10.1007/s11852-008-0011-1.
Recovery of corals a decade after a bleaching event in Dubai, United Arab Emirates. 2008. J. Burt, A. Bartholomew, P. Usseglio.Mar Biol 154:27–36 DOI 10.1007/s00227-007-0892-9.
Baseline Biological Monitoring of Miami-Dade Limerock Module and Single Layer Boulder Reefs 2008.Miami-Dade County Department of Environmental Resources Management. 2008